nanonet
| JNNB Top | Subscribe Now! | INTERVIEW | YOUNG RESEARCHERS | TEXT | Past Issues |
JNNB Search

JAPAN NANONET BULLETIN - 56th Issue - October 27, 2005

YOUNG RESEARCHERS’ INTRODUCTION

Takashi TANII
Associate Professor, Graduate School of Science and Engineering, Waseda University

Silicon nanostructure fabrication and its application to biomolecules

(Issued in Japanese: April 6, 2004)

During the 2001 academic year, Waseda University began a five year COE (Center of Excellence) project entitled “Molecular nano-engineering” with grants from the Ministry of Education, Sports, Culture, Science and Technology (MEXT). Our aims in cooperation with molecular biologists are the “Establishment of wafer-scale nanostructure fabrication process”, “Preferential immobilization of biomolecules onto nanostructure array” and “Single molecule analysis by means of near-field optical imaging via nano-hole wave-guides”.

Biomolecules have sophisticated functions, such as self-assembly, catalytic molecular recognition and self-restoration. By combining the ability to self-assemble with conventional lithography processes, we can fabricate well-designed nanostructured patterns for single molecule immobilization. For example, figure 1 shows high-density DNA nanostructured patterns formed in a self-assembled monolayer. These well-designed structures allow us also to observe the dynamics of intramolecular interactions in real time. As shown in figure 2, the nanohole arrays, in which functional proteins are immobilized, serve as wave-guides for near-field optical imaging. We can identify intramolecular interactions in vitro using concentrations similar to those found in real cells.

Shuji MONONOBE
Takashi TANII
Associate Professor, Graduate School of Science and Engineering, Waseda University
 
1996Master of Engineering, Graduate School of Science and Engineering, Waseda University
 Nippon Telegram and Telephone Corporation
2001Research Associate, School of Science and Engineering, Waseda University
2002Doctor of Engineering, Waseda University
2003Lecturer, Graduate School of Science and Engineering Waseda University
2005Associate Professor, Graduate School of Science and Engineering, Waseda University
E-mail:
Web Page

Fig. 1
Fig. 1 
Fluorescence image of target DNA labeled with Cy-5 hybridized to the probe DNA immobilized within the nanostructured patterns by means of electron beam lithography onto organosilane self-assembled monolayer resist (Size:250nm, Pitch:2.5µm).
Fig. 2
Fig. 2 
Fluorescence images of single GroEL enzymes labeled with IC-5 immobilized in the metal nanohole array on a quartz glass substrate. The quantized photo-bleaching proves the single molecule detection in each nanohole. The fluorescent dye Cy-5, which is diffused in water so that it mimics a protein in order to interact with GroEL, does not produce background noises because the laser light is guided only to the immobilized GroEL via the nanohole wave-guides.

Relevant papers
  1. Tanii, T., Hosaka, T., Miyake, T., Zhang, G-J., Zako, T., Funatsu, T. & Ohdomari, I.
    Preferential immobilization of biomolecules on silicon microstructure array by means of electron beam lithography on organosilane self-assembled monolayer resist
    Appl. Surf. Sci. 234, 102-106 (2004).
  2. Zhang, G-J., Tanii, T., Zako, T., Hosaka, T., Miyake, T., Kanari, Y., Funatsu, T. & Ohdomari, I.
    Nanoscale patterning of Protein Using Electron Beam Lithography of Organosilane Self-Assembled Monolayers
    Small (2005) in press.